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Make cue notes like dynamic parts. So you can paste the notes of one instrument into another as cue notes. Then if you make changes to the original notes, those change would be reflected in the cue notes (and vice versa).
Allow different repeat start and end points for each instrument. For example an accompaniment may repeat many times whilst one or more lead instruments play different variations of a tune
Scorch or a Sibelius file viewer app for Android devices that let you transpose the score would be extremely useful.